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htSNP finder - PCA Based Methods
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Publication, figures, results per dataset
Article
Feb 2, 2017
Author:
Zhen Lin
PDF of the American Journal of Human Genetics Publicaton
1. Color-version of the figures from the paper
Figure 2
Feb 2, 2017
Author:
Zhen Lin
htSNPs explaining 90% of the variance in the ACE data set.
Figure 3
Feb 2, 2017
Author:
Zhen Lin
Leave-one-out cross-validation on the ACE data set.
Figure 4
Feb 2, 2017
Author:
Zhen Lin
Leave-one-out cross-validation on the ABCB1 data set.
Figure 5
Feb 2, 2017
Author:
Zhen Lin
10-Fold cross-validation on the IBD data set.
2. Graphic displays of htSNPs that we identified from three experimental data sets explaining 90% of variance in the data
ABCBdataset
Feb 2, 2017
Author:
Zhen Lin
htSNPs from ABCB dataset
ACEdataset
Feb 2, 2017
Author:
Zhen Lin
htSNPs from ACE dataset
IBDdataset
Feb 2, 2017
Author:
Zhen Lin
htSNPs from IBD dataset
3. Additional notes
Notes on Varimax
Feb 2, 2017
Author:
Zhen Lin
More descriptions and an example of finding htSNPs using the varimax rotation algorithm
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Last updated
Feb 24, 2024
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