STAMS 1.2 is the most stable release and we recommend using it. However... STAMS 1.8 works with the new igraph, and runs the searches in parallel using the parallel package in R. One small test sets, it works well. We are still testing larger runs. I recommend running an interactive job on your cluster to run this package in parallel. Depending on what kind of scheduler your cluster uses, there are parallelization packages that will allow you to submit it as a batch script and not an interactive job. On SLURM, I use rslurm from CRAN. The main function takes a cluster as an argument, and you can set up that cluster however you like.Notes View License
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STAMS 1.2 works with older igraph version 0.7.1. It runs on a full network in 4-5 days on a single processor. It is our stable release. There are major data structure and UI differences between the two igraph versions. STAMS 1.2 will not work with igraph > 1.0. View License