SimTK: STRUCTURAL INSIGHTS INTO PRE-TRANSLOCATION RIBOSOME MOTIONS: Downloads

STRUCTURAL INSIGHTS INTO PRE-TRANSLOCATION RIBOSOME MOTIONS

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This contains the R1-R2-RF trajectory, with the tRNA attached to the 16S head domain.
Downloads instructions and details

R1-R2-RF-trajectory

Trajectory of ribosomal motion from R1 to R2 to RF, with tRNA attached to head domain.

R1-R2-RF trajectory

Jul 23, 2010

R1-R2-RF trajectory with tRNA attached to head

Download Package

Download Links

R1R2RF-co-moving.pdb.gz

Jul 23, 2010

258 MB

Any

Data/images/video

R1-R2-RF trajectory with tRNA attached to 16S head

contacts.dat

Jul 23, 2010

87 KB

Any

Data/images/video

RNABuilder input file to generate R1-R2-RF motion

last.3.pdb.gz

Jul 23, 2010

4 MB

Any

Data/images/video

initial coordinates for RNABuilder 2.0 run that generates R1-R2-RF trajectory

PLEASE CITE THESE PAPERS

Samuel Flores and Russ Altman, "Structural insights into pre-translocation ribosome motions," Proceedings of the Pacific Symposium on Biocomputing, 2011, submitted. (2011) View

SimTK is maintained through Grant R01GM124443 01A1 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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