This package contains the Force Field files that can be used in Gromacs 4.5.x for setting up a MD simulation of the PSII core complex. It can be also useful to simulate or develop FF parameters for other systems with related cofactors.
files for running MD simulations with protein-cofactor system
PLEASE CITE THESE PAPERS
Zhang L, Silva D-A, Yan Y, Huang X. Force field development for cofactors in the photosystem II. J Comput Chem. Sep 30;33(25):1969-80, (2012) (2012) View